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LOC119881754 collagen alpha-1(I) chain-like [ Canis lupus familiaris (dog) ]

Gene ID: 119881754, updated on 5-Jun-2021

Summary

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Gene symbol
LOC119881754
Gene description
collagen alpha-1(I) chain-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Annotation information
Annotation category: not annotated on reference assembly
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Genomic context

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See LOC119881754 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (35708737..35724776)

Chromosome 13 - NC_006595.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119874438 Neighboring gene G protein-coupled receptor 20 Neighboring gene protein tyrosine phosphatase 4A3 Neighboring gene maestro heat like repeat family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006595.4 Chromosome 13 Alternate Dog10K_Boxer_Tasha Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
collagen alpha-1(I) chain-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    35708737..35724776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688817.1 → XP_038544745.1  collagen alpha-1(I) chain-like

    Conserved Domains (1) summary
    PHA03378
    Location:132 → 255
    PHA03378; EBNA-3B; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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