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LOC120495604 tryptase-like [ Pimephales promelas (fathead minnow) ]

Gene ID: 120495604, updated on 7-Dec-2023

Summary

Gene symbol
LOC120495604
Gene description
tryptase-like
Locus tag
F2P79_017219
Gene type
protein coding
RefSeq status
MODEL
Organism
Pimephales promelas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Leuciscidae; Pogonichthyinae; Pimephales
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Genomic context

See LOC120495604 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current EPA_FHM_2.0 (GCF_016745375.1) Unplaced Scaffold NW_024121477.1 (1493076..1496329, complement)

NW_024121477.1Genomic Context describing neighboring genes Neighboring gene caveolin 1 Neighboring gene MET proto-oncogene, receptor tyrosine kinase Neighboring gene family with sequence similarity 185 member A Neighboring gene F-box and leucine-rich repeat protein 13 Neighboring gene armadillo repeat containing 10 Neighboring gene cation/H+ exchanger protein 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_024121477 Unplaced Scaffold Reference EPA_FHM_2.0 Primary Assembly

General protein information

Preferred Names
serine protease 27-like; tryptase-like
Names
serine protease 33-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pimephales promelas Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EPA_FHM_2.0 Primary Assembly

Genomic

  1. NW_024121477.1 Reference EPA_FHM_2.0 Primary Assembly

    Range
    1493076..1496329 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039695254.1XP_039551188.1  tryptase-like isoform X2

    Conserved Domains (1) summary
    cd00190
    Location:33263
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
  2. XM_039695255.1XP_039551189.1  tryptase-like isoform X3

    Conserved Domains (1) summary
    cd00190
    Location:8194
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
  3. XM_039695253.1XP_039551187.1  tryptase-like isoform X1

    Conserved Domains (1) summary
    cd00190
    Location:33263
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
  4. XM_039695256.1XP_039551190.1  serine protease 27-like isoform X4

    Conserved Domains (1) summary
    cd00190
    Location:33217
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...