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LOC121627719 sodium/potassium/calcium exchanger 1-like [ Chelmon rostratus (copperband butterflyfish) ]

Gene ID: 121627719, updated on 7-Dec-2023

Summary

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Gene symbol
LOC121627719
Gene description
sodium/potassium/calcium exchanger 1-like
See related
EnsemblRapid:ENSCRTG00005014628
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelmon rostratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Chaetodontiformes; Chaetodontidae; Chelmon
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Genomic context

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Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fCheRos1.pri (GCF_017976325.1) 1 NC_055658.1 (24786700..24805053, complement)

Chromosome 1 - NC_055658.1Genomic Context describing neighboring genes Neighboring gene suppressor of cytokine signaling 4 Neighboring gene C-myc promoter-binding protein-like Neighboring gene very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like Neighboring gene solute carrier family 22 member 18

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_055658.1 Chromosome 1 Reference fCheRos1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium, potassium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic depression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-term synaptic potentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium/calcium exchanger 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelmon rostratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fCheRos1.pri Primary Assembly

Genomic

  1. NC_055658.1 Reference fCheRos1.pri Primary Assembly

    Range
    24786700..24805053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041966744.1 → XP_041822678.1  sodium/potassium/calcium exchanger 1-like isoform X2

    Conserved Domains (1) summary
    TIGR00927
    Location:129 → 702
    2A1904; K+-dependent Na+/Ca+ exchanger

  2. XM_041966736.1 → XP_041822670.1  sodium/potassium/calcium exchanger 1-like isoform X1

    Related
    ENSCRTP00005036947.1, ENSCRTT00005037177.1
    Conserved Domains (1) summary
    TIGR00927
    Location:129 → 732
    2A1904; K+-dependent Na+/Ca+ exchanger
Nucleotide Protein
Heading Accession and Version