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PDE11A phosphodiesterase 11A [ Mauremys mutica (yellowpond turtle) ]

Gene ID: 123378885, updated on 22-Mar-2024

Summary

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Gene symbol
PDE11A
Gene description
phosphodiesterase 11A
Locus tag
KIL84_012456
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys mutica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
human mouse all
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Genomic context

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See PDE11A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
24
Annotation release Status Assembly Chr Location
100 current ASM2049712v1 (GCF_020497125.1) 10 NC_059081.1 (42826601..43096191, complement)

Chromosome 10 - NC_059081.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123378498 Neighboring gene NFE2 like bZIP transcription factor 2 Neighboring gene alkylglycerone phosphate synthase Neighboring gene uncharacterized LOC123378890 Neighboring gene intraflagellar transport 70B Neighboring gene uncharacterized LOC123378891 Neighboring gene cytochrome c, testis-specific Neighboring gene RNA binding motif protein 45

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059081.1 Chromosome 10 Reference ASM2049712v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2049712v1 Primary Assembly

Genomic

  1. NC_059081.1 Reference ASM2049712v1 Primary Assembly

    Range
    42826601..43096191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045033135.1 → XP_044889070.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1

    UniProtKB/TrEMBL
    A0A9D4B8L8
    Conserved Domains (2) summary
    smart00065
    Location:66 → 229
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    cd00077
    Location:513 → 689
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif

  2. XM_045033136.1 → XP_044889071.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X2

    Conserved Domains (2) summary
    smart00065
    Location:119 → 286
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:381 → 616
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_045033137.1 → XP_044889072.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X3

    Conserved Domains (2) summary
    smart00065
    Location:77 → 244
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:339 → 574
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_045033138.1 → XP_044889073.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X4

    Conserved Domains (2) summary
    smart00065
    Location:44 → 211
    GAF; Domain present in phytochromes and cGMP-specific phosphodiesterases
    pfam00233
    Location:306 → 541
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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