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LOC123378888 cytochrome c, testis-specific [ Mauremys mutica (yellowpond turtle) ]

Gene ID: 123378888, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123378888
Gene description
cytochrome c, testis-specific
Locus tag
KIL84_012778
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys mutica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
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Genomic context

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See LOC123378888 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM2049712v1 (GCF_020497125.1) 10 NC_059081.1 (43112427..43127949, complement)

Chromosome 10 - NC_059081.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 11A Neighboring gene intraflagellar transport 70B Neighboring gene uncharacterized LOC123378891 Neighboring gene RNA binding motif protein 45 Neighboring gene oxysterol binding protein like 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059081.1 Chromosome 10 Reference ASM2049712v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial electron transport, ubiquinol to cytochrome c IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c, testis-specific

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2049712v1 Primary Assembly

Genomic

  1. NC_059081.1 Reference ASM2049712v1 Primary Assembly

    Range
    43112427..43127949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045033151.1 → XP_044889086.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  2. XM_045033155.1 → XP_044889090.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  3. XM_045033157.1 → XP_044889092.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  4. XM_045033158.1 → XP_044889093.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  5. XM_045033150.1 → XP_044889085.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  6. XM_045033149.1 → XP_044889084.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  7. XM_045033152.1 → XP_044889087.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  8. XM_045033153.1 → XP_044889088.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  9. XM_045033154.1 → XP_044889089.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  10. XM_045033143.1 → XP_044889078.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  11. XM_045033146.1 → XP_044889081.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  12. XM_045033147.1 → XP_044889082.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  13. XM_045033148.1 → XP_044889083.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  14. XM_045033145.1 → XP_044889080.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]

  15. XM_045033144.1 → XP_044889079.1  cytochrome c, testis-specific

    UniProtKB/TrEMBL
    A0A9D3XRQ6
    Conserved Domains (1) summary
    COG3474
    Location:1 → 105
    Cyc7; Cytochrome c2 [Energy production and conversion]
Nucleotide Protein
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