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LOC123402505 transcription factor bHLH95 [ Hordeum vulgare subsp. vulgare (domesticated barley) ]

Gene ID: 123402505, updated on 30-Nov-2023

Summary

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Gene symbol
LOC123402505
Gene description
transcription factor bHLH95
Gene type
protein coding
RefSeq status
MODEL
Organism
Hordeum vulgare subsp. vulgare (sub-species: vulgare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
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Genomic context

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See LOC123402505 in Genome Data Viewer
Location:
chromosome: 6H
Exon count:
3
Annotation release Status Assembly Chr Location
100 current MorexV3_pseudomolecules_assembly (GCF_904849725.1) 6H NC_058523.1 (56721945..56726687, complement)

Chromosome 6H - NC_058523.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123404585 Neighboring gene fasciclin-like arabinogalactan protein 1 Neighboring gene uncharacterized LOC123404508 Neighboring gene F-box/LRR-repeat protein At3g59190-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_058523.1 Chromosome 6H Reference MorexV3_pseudomolecules_assembly Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries. Matsumoto T, et al. Plant Physiol, 2011 May. PMID 21415278, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosperm development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH95
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hordeum vulgare subsp. vulgare Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MorexV3_pseudomolecules_assembly Primary Assembly

Genomic

  1. NC_058523.1 Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Range
    56721945..56726687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045096427.1 → XP_044952362.1  transcription factor bHLH95

    UniProtKB/TrEMBL
    F2EAI0
    Conserved Domains (1) summary
    cd11393
    Location:80 → 133
    bHLH_AtbHLH_like; basic helix-loop-helix (bHLH) domain found in Arabidopsis thaliana genes coding transcription factors and similar proteins
Nucleotide Protein
Heading Accession and Version

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