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VAMP2 vesicle associated membrane protein 2 [ Lemur catta (Ring-tailed lemur) ]

Gene ID: 123650922, updated on 22-Mar-2024

Summary

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Gene symbol
VAMP2
Gene description
vesicle associated membrane protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lemur catta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur
Orthologs
human mouse all
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Genomic context

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See VAMP2 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
100 current mLemCat1.pri (GCF_020740605.2) 15 NC_059142.1 (10658156..10662030, complement)

Chromosome 15 - NC_059142.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene period circadian regulator 1 Neighboring gene U8 small nucleolar RNA Neighboring gene transmembrane protein 107

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059142.1 Chromosome 15 Reference mLemCat1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin-1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle-associated membrane protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lemur catta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLemCat1.pri Primary Assembly

Genomic

  1. NC_059142.1 Reference mLemCat1.pri Primary Assembly

    Range
    10658156..10662030 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045570202.1 → XP_045426158.1  vesicle-associated membrane protein 2

    Conserved Domains (1) summary
    cd15870
    Location:30 → 92
    R-SNARE_VAMP2; SNARE motif of VAMP2
Nucleotide Protein
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