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LOC123650936 60S ribosomal protein L39 [ Lemur catta (Ring-tailed lemur) ]

Gene ID: 123650936, updated on 16-Nov-2023

Summary

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Gene symbol
LOC123650936
Gene description
60S ribosomal protein L39
Gene type
protein coding
RefSeq status
MODEL
Organism
Lemur catta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur
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Genomic context

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See LOC123650936 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
100 current mLemCat1.pri (GCF_020740605.2) 1 NC_059128.1 (65061016..65065486)

Chromosome 1 - NC_059128.1Genomic Context describing neighboring genes Neighboring gene ER membrane protein complex subunit 9 Neighboring gene proteasome activator subunit 1 Neighboring gene fat storage inducing transmembrane protein 1 Neighboring gene DDB1 and CUL4 associated factor 11 Neighboring gene phosphoenolpyruvate carboxykinase 2, mitochondrial Neighboring gene neural retina leucine zipper

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_059128.1 Chromosome 1 Reference mLemCat1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lemur catta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLemCat1.pri Primary Assembly

Genomic

  1. NC_059128.1 Reference mLemCat1.pri Primary Assembly

    Range
    65061016..65065486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045570244.1 → XP_045426200.1  60S ribosomal protein L39

    Conserved Domains (1) summary
    pfam00832
    Location:9 → 50
    Ribosomal_L39; Ribosomal L39 protein

  2. XM_045570235.1 → XP_045426191.1  60S ribosomal protein L39

    Conserved Domains (1) summary
    pfam00832
    Location:9 → 50
    Ribosomal_L39; Ribosomal L39 protein

  3. XM_045570253.1 → XP_045426209.1  60S ribosomal protein L39

    Conserved Domains (1) summary
    pfam00832
    Location:9 → 50
    Ribosomal_L39; Ribosomal L39 protein
Nucleotide Protein
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