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LOC124900165 uncharacterized LOC124900165 [ Homo sapiens (human) ]

Gene ID: 124900165, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124900165
Gene description
uncharacterized LOC124900165
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124900165 in Genome Data Viewer
Location:
4p16.2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (4542131..4772575)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (4511705..4741088)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene syntaxin 18 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21229 Neighboring gene VISTA enhancer hs746 Neighboring gene uncharacterized LOC107986254 Neighboring gene ribosomal protein S7 pseudogene 15 Neighboring gene Sharpr-MPRA regulatory region 11878 Neighboring gene STX18 antisense RNA 1 (head to head) Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15215 Neighboring gene long intergenic non-protein coding RNA 3091 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4584074-4584574 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4611951-4612940 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:4641873-4642792 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:4643711-4644628 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4652800-4653697 Neighboring gene NFE2L2 motif-containing MPRA enhancer 85 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4666938-4667438 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:4668341-4668936 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15216 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:4672506-4673099 Neighboring gene small nucleolar RNA, C/D box 162 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21231 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:4760651-4761066 Neighboring gene uncharacterized LOC101928279 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:4764243-4765442 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:4782258-4783457 Neighboring gene Sharpr-MPRA regulatory region 11147 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4853897-4854854 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:4854855-4855811 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15217 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15218 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:4864037-4864708 Neighboring gene long intergenic non-protein coding RNA 1396 Neighboring gene msh homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

General protein information

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Preferred Names
uncharacterized protein LOC124900165

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    4542131..4772575
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047416490.1 → XP_047272446.1  uncharacterized protein LOC124900165

  2. XM_047416488.1 → XP_047272444.1  uncharacterized protein LOC124900165

  3. XM_047416489.1 → XP_047272445.1  uncharacterized protein LOC124900165

  4. XM_047416487.1 → XP_047272443.1  uncharacterized protein LOC124900165

  5. XM_047416491.1 → XP_047272447.1  uncharacterized protein LOC124900165

  6. XM_047416485.1 → XP_047272441.1  uncharacterized protein LOC124900165

  7. XM_047416486.1 → XP_047272442.1  uncharacterized protein LOC124900165

  8. XM_047416492.1 → XP_047272448.1  uncharacterized protein LOC124900165

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    4511705..4741088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054351353.1 → XP_054207328.1  uncharacterized protein LOC124900165

  2. XM_054351351.1 → XP_054207326.1  uncharacterized protein LOC124900165

  3. XM_054351352.1 → XP_054207327.1  uncharacterized protein LOC124900165

  4. XM_054351355.1 → XP_054207330.1  uncharacterized protein LOC124900165

  5. XM_054351356.1 → XP_054207331.1  uncharacterized protein LOC124900165

  6. XM_054351354.1 → XP_054207329.1  uncharacterized protein LOC124900165

  7. XM_054351350.1 → XP_054207325.1  uncharacterized protein LOC124900165

  8. XM_054351357.1 → XP_054207332.1  uncharacterized protein LOC124900165

Nucleotide Protein
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