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LOC124900334 small Cajal body-specific RNA 11 [ Homo sapiens (human) ]

Gene ID: 124900334, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124900334
Gene description
small Cajal body-specific RNA 11
See related
Ensembl:ENSG00000252727
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
12p13.31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (8597509..8597640)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (8580963..8581094)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 4 member E Neighboring gene uncharacterized LOC124902872 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:8715978-8716610 Neighboring gene uncharacterized LOC105369645 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:8717245-8717876 Neighboring gene activation induced cytidine deaminase Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:8779867-8780858 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 5936 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:8788329-8789138 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:8790755-8791562 Neighboring gene HADHA pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    8597509..8597640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007063636.1 RNA Sequence

    Related
    ENST00000516918.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    8580963..8581094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007083502.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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