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LOC124901401 uncharacterized LOC124901401 [ Homo sapiens (human) ]

Gene ID: 124901401, updated on 10-Oct-2023

Summary

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Gene symbol
LOC124901401
Gene description
uncharacterized LOC124901401
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC124901401 in Genome Data Viewer
Location:
6q22.33
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (129479613..129486474, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (130674815..130680151, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene laminin subunit alpha 2 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129493212-129493926 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:129493927-129494640 Neighboring gene bone morphogenetic protein receptor type 1A pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:129561118-129561327 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:129572793-129572997 Neighboring gene NANOG hESC enhancer GRCh37_chr6:129691636-129692145 Neighboring gene NANOG hESC enhancer GRCh37_chr6:129761748-129762353 Neighboring gene RNA, U6 small nuclear 861, pseudogene Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:129811717-129812916 Neighboring gene uncharacterized LOC102723409 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:129822854-129824053 Neighboring gene Sharpr-MPRA regulatory region 13537 Neighboring gene MPRA-validated peak6120 silencer Neighboring gene Rho GTPase activating protein 18 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25044 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25045 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25046 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17532 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17533 Neighboring gene Sharpr-MPRA regulatory region 14599 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25047 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25048

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    129479613..129486474 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007059767.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    130674815..130680151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007077133.1 RNA Sequence

Nucleotide Protein
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