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LOC124901839 small nucleolar RNA U13 [ Homo sapiens (human) ]

Gene ID: 124901839, updated on 27-Aug-2024

Summary

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Gene symbol
LOC124901839
Gene description
small nucleolar RNA U13
Gene type
snoRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
7q21.13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (90607004..90607108, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (91855277..91855381, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:90032955-90033480 Neighboring gene Sharpr-MPRA regulatory region 3343 Neighboring gene claudin 12 Neighboring gene Sharpr-MPRA regulatory region 14602 Neighboring gene uncharacterized LOC124901693 Neighboring gene PTTG1IP family member 2 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:90208498-90209697 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18358 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18359 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18360 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18361 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26246 Neighboring gene MPRA-validated peak6628 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26247 Neighboring gene cyclin dependent kinase 14 Neighboring gene TVP23C pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26248 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26249 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26250 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26251 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr7:90394025-90394596 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:90395797-90396298 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:90396299-90396798 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26252 Neighboring gene uncharacterized LOC124901694

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    90607004..90607108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007060675.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    91855277..91855381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007078537.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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