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D external scaffolding protein [ Enterobacteria phage alpha3 ]

Gene ID: 1260694, updated on 15-Aug-2018

Summary

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Gene symbol
D
Gene description
external scaffolding protein
Locus tag
alpha3p05
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Enterobacteria phage alpha3 (isolate: wildtype, nat-host: Escherichia coli)
Lineage
Viruses; ssDNA viruses; Microviridae; Bullavirinae; Alpha3microvirus
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Genomic context

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Sequence:
NC_001330.1 (2503..2955)

NC_001330.1Genomic Context describing neighboring genes Neighboring gene replication initiation protein Neighboring gene internal scaffolding protein Neighboring gene hypothetical protein Neighboring gene DNA maturation protein Neighboring gene cell lysis protein Neighboring gene DNA packaging protein Neighboring gene capsid protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001330.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Nucleotide sequence of the genome of the bacteriophage alpha 3: interrelationship of the genome structure and the gene products with those of the phages, phi X174, G4 and phi K. Kodaira K, et al. Biochim Biophys Acta, 1992 Apr 6. PMID 1532908

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
external scaffolding protein
NP_039594.1
  • 240 molecules of protein D form an external scaffold required for the formation of Microvirus procapsid. Not present in mature particles. other names: protein D, gpD; function: morphogenesis

VOG classification

Description:

  • VOGp0006 [S] Capsid morphogenesis protein
  • Structural Proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001330.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039594.1 capsid morphogenesis protein [Enterobacteria phage alpha3]

    See identical proteins and their annotated locations for NP_039594.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P08765
    UniProtKB/TrEMBL
    Q2LL29
    Conserved Domains (1) summary
    PHA00006
    Location:1 → 150
    D; external scaffolding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P08765.2

Gene LinkOut

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