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LOC127904336 B3 domain-containing transcription factor NGA4-like [ Populus trichocarpa (black cottonwood) ]

Gene ID: 127904336, updated on 23-Nov-2023

Summary

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Gene symbol
LOC127904336
Gene description
B3 domain-containing transcription factor NGA4-like
Locus tag
POPTR_015G016450v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC127904336 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 15 NC_037299.2 (1126150..1146885)

Chromosome 15 - NC_037299.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127904335 Neighboring gene B3 domain-containing transcription factor NGA4 Neighboring gene probable plastid-lipid-associated protein 14, chloroplastic Neighboring gene probable plastid-lipid-associated protein 14, chloroplastic Neighboring gene probable plastid-lipid-associated protein 14, chloroplastic Neighboring gene probable plastid-lipid-associated protein 14, chloroplastic Neighboring gene splicing factor SF3a60 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037299.2 Chromosome 15 Reference P.trichocarpa_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B3 domain-containing transcription factor NGA4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037299.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    1126150..1146885
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_052447321.1 → XP_052303281.1  B3 domain-containing transcription factor NGA4-like

Nucleotide Protein
Heading Accession and Version

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