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Endog endonuclease G [ Mus musculus (house mouse) ]

Gene ID: 13804, updated on 9-Dec-2024

Summary

Official Symbol
Endogprovided by MGI
Official Full Name
endonuclease Gprovided by MGI
Primary source
MGI:MGI:1261433
See related
Ensembl:ENSMUSG00000015337 AllianceGenome:MGI:1261433
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables DNA endonuclease activity; magnesium ion binding activity; and protein homodimerization activity. Involved in negative regulation of TOR signaling and positive regulation of autophagy. Acts upstream of or within several processes, including apoptotic DNA fragmentation; in utero embryonic development; and response to tumor necrosis factor. Located in mitochondrion. Is expressed in several structures, including brown fat; gut; liver; male reproductive gland or organ; and respiratory system. Orthologous to human ENDOG (endonuclease G). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in ovary adult (RPKM 57.2), duodenum adult (RPKM 56.0) and 28 other tissues See more
Orthologs
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Genomic context

See Endog in Genome Data Viewer
Location:
2 B; 2 21.29 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (30061525..30064057)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (30171408..30174069)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 (zinc transporter), member 1, pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E7803 Neighboring gene predicted gene, 31080 Neighboring gene STARR-positive B cell enhancer ABC_E2609 Neighboring gene SPOUT domain containing methyltransferase 1 Neighboring gene kynurenine aminotransferase 1 Neighboring gene predicted gene, 31201 Neighboring gene STARR-seq mESC enhancer starr_04089 Neighboring gene STARR-seq mESC enhancer starr_04090 Neighboring gene RIKEN cDNA 1700084E18 gene Neighboring gene STARR-positive B cell enhancer ABC_E7804

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (5)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA endonuclease activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA endonuclease activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables DNA endonuclease activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA nuclease activity ISO
Inferred from Sequence Orthology
more info
 
enables RNA endonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables magnesium ion binding IDA
Inferred from Direct Assay
more info
PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in DNA catabolic process TAS
Traceable Author Statement
more info
PubMed 
involved_in DNA damage response ISO
Inferred from Sequence Orthology
more info
 
involved_in DNA damage response ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in apoptotic DNA fragmentation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within apoptotic DNA fragmentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to glucose stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to hypoxia IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within in utero embryonic development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitochondrial DNA catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in mitochondrial DNA catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of TOR signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of TOR signaling ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of apoptotic DNA fragmentation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of apoptotic DNA fragmentation ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of apoptotic process TAS
Traceable Author Statement
more info
PubMed 
involved_in positive regulation of autophagy IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of autophagy ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of hydrogen peroxide-mediated programmed cell death IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of hydrogen peroxide-mediated programmed cell death ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of mitochondrial DNA replication ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of mitochondrial DNA replication ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within response to antibiotic IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to estradiol IEA
Inferred from Electronic Annotation
more info
 
involved_in response to mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within response to tumor necrosis factor IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in perikaryon IEA
Inferred from Electronic Annotation
more info
 
located_in perikaryon ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
endonuclease G, mitochondrial
Names
endo G
NP_031957.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007931.2NP_031957.1  endonuclease G, mitochondrial precursor

    See identical proteins and their annotated locations for NP_031957.1

    Status: VALIDATED

    Source sequence(s)
    AL845258
    Consensus CDS
    CCDS15872.1
    UniProtKB/Swiss-Prot
    O08600
    UniProtKB/TrEMBL
    Q3UN47
    Related
    ENSMUSP00000015481.6, ENSMUST00000015481.6
    Conserved Domains (2) summary
    smart00477
    Location:75281
    NUC; DNA/RNA non-specific endonuclease
    COG1864
    Location:29278
    NUC1; DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]

RNA

  1. NR_184725.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL845258
  2. NR_184726.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL845258
  3. NR_184727.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL845258

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    30061525..30064057
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)