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Epx eosinophil peroxidase [ Mus musculus (house mouse) ]

Gene ID: 13861, updated on 7-Aug-2024

Summary

Official Symbol
Epxprovided by MGI
Official Full Name
eosinophil peroxidaseprovided by MGI
Primary source
MGI:MGI:107569
See related
Ensembl:ENSMUSG00000052234 AllianceGenome:MGI:107569
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EPO
Summary
This gene encodes a member of the peroxidase superfamily of enzymes that is produced by eosinophils and plays a critical role in eliminating tissue-invasive parasites. The encoded preproprotein undergoes proteolytic processing to generate a heterodimeric enzyme that forms a predominant component of the intracellular granules of eosinophils. Mice lacking the encoded protein exhibit resistance to ulcerative colitis induced by dextran sulfate. [provided by RefSeq, Jul 2016]
Expression
Biased expression in spleen adult (RPKM 2.1), liver E14 (RPKM 1.9) and 5 other tissues See more
Orthologs
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Genomic context

See Epx in Genome Data Viewer
Location:
11 C; 11 52.25 cM
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (87754824..87766362, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (87863997..87875536, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene lactoperoxidase Neighboring gene STARR-seq mESC enhancer starr_30300 Neighboring gene MKS transition zone complex subunit 1 Neighboring gene olfactory receptor family 4 subfamily D member 2B Neighboring gene olfactory receptor family 4 subfamily D member 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (7)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables lactoperoxidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
enables peroxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peroxidase activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
eosinophil peroxidase
NP_031972.2
XP_006532236.1
XP_006532237.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001430879.1NP_001417808.1  eosinophil peroxidase isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL606805
    UniProtKB/TrEMBL
    Q3V1J3
  2. NM_007946.3NP_031972.2  eosinophil peroxidase isoform 1 precursor

    See identical proteins and their annotated locations for NP_031972.2

    Status: VALIDATED

    Source sequence(s)
    AL606805
    Consensus CDS
    CCDS25220.1
    UniProtKB/Swiss-Prot
    P49290, Q5SW51, Q61798
    Related
    ENSMUSP00000050497.4, ENSMUST00000049768.4
    Conserved Domains (2) summary
    cd09824
    Location:288700
    myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
    pfam03098
    Location:146684
    An_peroxidase; Animal haem peroxidase

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    87754824..87766362 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006532173.4XP_006532236.1  eosinophil peroxidase isoform X1

    Conserved Domains (1) summary
    cd09824
    Location:31443
    myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases
  2. XM_006532174.4XP_006532237.1  eosinophil peroxidase isoform X2

    Conserved Domains (1) summary
    cd09824
    Location:1387
    myeloperoxidase_like; Myeloperoxidases, eosinophil peroxidases, and lactoperoxidases