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F489_gp20 helix-turn-helix domain-containing protein [ Liberibacter phage SC2 ]

Gene ID: 14017313, updated on 31-May-2023

Summary

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Gene symbol
F489_gp20
Gene description
helix-turn-helix domain-containing protein
Locus tag
F489_gp20
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Liberibacter phage SC2 (nat-host: Candidatus Liberibacter asiaticus UF506)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Podoviridae
Old locus tag
SC2_gp125
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Genomic context

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Sequence:
NC_019550.1 (19802..20401, complement)

NC_019550.1Genomic Context describing neighboring genes Neighboring gene putative terminase large subunit Neighboring gene terminase small subunit Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_019550.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. 'Ca. Liberibacter asiaticus' carries an excision plasmid prophage and a chromosomally integrated prophage that becomes lytic in plant infections. Zhang S, et al. Mol Plant Microbe Interact, 2011 Apr. PMID 21190436

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
helix-turn-helix domain-containing protein
YP_007011115.1
  • putative phage-related repressor protein C2; cd00093 superfamily

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_019550.1 Reference assembly

    Range
    19802..20401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_007011115.1 helix-turn-helix domain-containing protein [Liberibacter phage SC2]

    See identical proteins and their annotated locations for YP_007011115.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E7DUK9
    Conserved Domains (1) summary
    cd00093
    Location:116 → 173
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
Heading Accession and Version

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