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spc1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 14217705, updated on 11-Sep-2024

Summary

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Official Symbol
spc1
Primary source
PomBase:SPBC887.22
Locus tag
SPOM_SPBC887.22
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
new19
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Genomic context

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Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (3537080..3538112)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA-binding transcription factor Rsv2 Neighboring gene ncRNA Neighboring gene 3-hydroxyacyl-ACP dehydratase Htd2 Neighboring gene ncRNA Neighboring gene RNase P subunit Rpr2 Neighboring gene centromere-specific histone H3 CENP-A Neighboring gene peptide release factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Augmented annotation of the Schizosaccharomyces pombe genome reveals additional genes required for growth and viability. Bitton DA, et al. Genetics, 2011 Apr. PMID 21270388, Free PMC Article
  2. High-Throughput Identification of Nuclear Envelope Protein Interactions in Schizosaccharomyces pombe Using an Arrayed Membrane Yeast-Two Hybrid Library. Varberg JM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33109728, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in protein targeting to ER IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in signal peptide processing IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of signal peptidase complex IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
signal peptidase complex subunit Spc1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3537080..3538112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001355819.2 → NP_001343171.1  signal peptidase complex subunit Spc1 [Schizosaccharomyces pombe]

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    G2TRR4
    Conserved Domains (1) summary
    pfam06645
    Location:8 → 77
    SPC12; Microsomal signal peptidase 12 kDa subunit (SPC12)
Nucleotide Protein
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