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Grslavgp1 polyprotein [ Grapevine rootstock stem lesion associated virus ]

Gene ID: 1463270, updated on 15-Aug-2018

Summary

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Gene symbol
Grslavgp1
Gene description
polyprotein
Locus tag
Grslavgp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Grapevine rootstock stem lesion associated virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; Closterovirus; unclassified Closterovirus
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Genomic context

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Sequence:
NC_004724.1 (107..10280)

NC_004724.1Genomic Context describing neighboring genes Neighboring gene p6 protein Neighboring gene HSP70-like protein Neighboring gene HSP90-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004724.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
polyprotein
Names
replicase
papain-like protease
papain-like protease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004724.1 Reference assembly

    Range
    107..10280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_835244.2 polyprotein [Grapevine rootstock stem lesion associated virus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8BEP9
    Conserved Domains (5) summary
    pfam05533
    Location:485 → 572
    Peptidase_C42; Beet yellows virus-type papain-like endopeptidase C42
    pfam12267
    Location:290 → 482
    DUF3614; Protein of unknown function (DUF3614)
    pfam00978
    Location:2902 → 3347
    RdRP_2; RNA dependent RNA polymerase
    pfam01443
    Location:2549 → 2816
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:904 → 1232
    Vmethyltransf; Viral methyltransferase

  2. NP_835337.1 replicase

    Conserved Domains (3) summary
    pfam00978
    Location:2061 → 2506
    RdRP_2; RNA dependent RNA polymerase
    pfam01443
    Location:1708 → 1975
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:63 → 391
    Vmethyltransf; Viral methyltransferase

  3. NP_835339.1 papain-like protease

    Conserved Domains (2) summary
    pfam05533
    Location:485 → 571
    Peptidase_C42; Beet yellows virus-type papain-like endopeptidase C42
    pfam12267
    Location:290 → 482
    DUF3614; Protein of unknown function (DUF3614)

  4. NP_835340.1 papain-like protease

    Conserved Domains (1) summary
    pfam05533
    Location:183 → 270
    Peptidase_C42; Beet yellows virus-type papain-like endopeptidase C42
Nucleotide Protein
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