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RdRp RNA dependent RNA polymerase [ Cymbidium mosaic virus ]

Gene ID: 1494007, updated on 18-Aug-2023

Summary

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Gene symbol
RdRp
Gene description
RNA dependent RNA polymerase
Locus tag
CymMVgp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cymbidium mosaic virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales; Alphaflexiviridae; Potexvirus
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Genomic context

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Sequence:
NC_001812.1 (73..4326)

NC_001812.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001812.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cymbidium mosaic potexvirus RNA: complete nucleotide sequence and phylogenetic analysis. Wong SM, et al. Arch Virol, 1997. PMID 9125051

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA dependent RNA polymerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001812.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_054025.1 RNA dependent RNA polymerase [Cymbidium mosaic virus]

    See identical proteins and their annotated locations for NP_054025.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1W7GKA3, A0A8E7MKA1, O10688
    Conserved Domains (3) summary
    pfam00978
    Location:1107 → 1260
    RdRP_2; RNA dependent RNA polymerase
    pfam01443
    Location:659 → 893
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:39 → 327
    Vmethyltransf; Viral methyltransferase
Nucleotide Protein
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