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Hint1 histidine triad nucleotide binding protein 1 [ Mus musculus (house mouse) ]

Gene ID: 15254, updated on 9-Dec-2024

Summary

Official Symbol
Hint1provided by MGI
Official Full Name
histidine triad nucleotide binding protein 1provided by MGI
Primary source
MGI:MGI:1321133
See related
Ensembl:ENSMUSG00000020267 AllianceGenome:MGI:1321133
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Hint; Ipk1; PKCI-1; PRKCNH1
Summary
Enables deSUMOylase activity. Involved in positive regulation of calcium-mediated signaling and protein desumoylation. Located in nucleus. Is expressed in several structures, including genitourinary system; gut; mammary gland; nervous system; and spleen. Human ortholog(s) of this gene implicated in Gamstorp-Wohlfart syndrome. Orthologous to human HINT1 (histidine triad nucleotide binding protein 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in kidney adult (RPKM 346.0), duodenum adult (RPKM 283.7) and 28 other tissues See more
Orthologs
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Genomic context

See Hint1 in Genome Data Viewer
Location:
11 B1.3; 11 32.13 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (54757209..54761332)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (54866383..54870506)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene LYR motif containing 7 Neighboring gene STARR-seq mESC enhancer starr_29513 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:54663563-54663764 Neighboring gene ATPase family, AAA domain containing 1 pseudogene Neighboring gene STARR-seq mESC enhancer starr_29515 Neighboring gene predicted gene, 31490 Neighboring gene VISTA enhancer mm1343 Neighboring gene glutathione peroxidase 3 Neighboring gene TNFAIP3 interacting protein 1 Neighboring gene STARR-positive B cell enhancer ABC_E11481 Neighboring gene 40S ribosomal protein S11-like

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (5)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables adenosine 5'-monophosphoramidase activity ISO
Inferred from Sequence Orthology
more info
 
enables adenosine 5'-monophosphoramidase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables deSUMOylase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables deSUMOylase activity ISO
Inferred from Sequence Orthology
more info
 
enables hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables hydrolase activity ISO
Inferred from Sequence Orthology
more info
 
enables hydrolase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in intrinsic apoptotic signaling pathway by p53 class mediator ISO
Inferred from Sequence Orthology
more info
 
involved_in intrinsic apoptotic signaling pathway by p53 class mediator ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of calcium-mediated signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein desumoylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein desumoylation ISO
Inferred from Sequence Orthology
more info
 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in purine ribonucleotide catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in purine ribonucleotide catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in purine ribonucleotide catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
part_of histone deacetylase complex ISO
Inferred from Sequence Orthology
more info
 
part_of histone deacetylase complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
adenosine 5'-monophosphoramidase HINT1
Names
PKC inhibitor/ interacting protein
adenosine 5'-monophosphoramidase
desumoylating isopeptidase HINT1
protein kinase C inhibitor 1
protein kinase C-interacting protein 1
NP_032274.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008248.3NP_032274.1  adenosine 5'-monophosphoramidase HINT1

    See identical proteins and their annotated locations for NP_032274.1

    Status: VALIDATED

    Source sequence(s)
    BC070415, BE995722, BY261801
    Consensus CDS
    CCDS24702.1
    UniProtKB/Swiss-Prot
    P70349
    Related
    ENSMUSP00000020504.6, ENSMUST00000020504.6
    Conserved Domains (1) summary
    cd01276
    Location:16118
    PKCI_related; Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    54757209..54761332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)