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Lhb luteinizing hormone beta [ Mus musculus (house mouse) ]

Gene ID: 16866, updated on 9-Dec-2024

Summary

Official Symbol
Lhbprovided by MGI
Official Full Name
luteinizing hormone betaprovided by MGI
Primary source
MGI:MGI:96782
See related
Ensembl:ENSMUSG00000100916 AllianceGenome:MGI:96782
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
LH; LH-B; LSH-B; Gm29035; LSH-beta
Summary
Predicted to enable hormone activity. Acts upstream of or within luteinizing hormone signaling pathway involved in ovarian follicle development. Located in cytoplasm. Is expressed in alimentary system; brain; genitourinary system; and heart. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 23 with or without anosmia. Orthologous to several human genes including LHB (luteinizing hormone subunit beta). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Biased expression in testis adult (RPKM 15.7), lung adult (RPKM 7.4) and 1 other tissue See more
Orthologs
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Genomic context

See Lhb in Genome Data Viewer
Location:
7 B3; 7 29.3 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (45070370..45071278)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (45417608..45421855)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene neurotrophin 5 Neighboring gene stabilizer of axonemal microtubules 3 Neighboring gene RuvB-like AAA ATPase 2 Neighboring gene STARR-positive B cell enhancer ABC_E349 Neighboring gene glycogen synthase 1, muscle Neighboring gene STARR-seq mESC enhancer starr_18840 Neighboring gene ferritin light polypeptide 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables hormone activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of pituitary gonadotropin complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
lutropin subunit beta
Names
leutropin
luteinizing hormone subunit beta
lutropin beta chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008497.2NP_032523.2  lutropin subunit beta precursor

    See identical proteins and their annotated locations for NP_032523.2

    Status: VALIDATED

    Source sequence(s)
    AV173269, BB618381, BM224915
    Consensus CDS
    CCDS21242.1
    UniProtKB/Swiss-Prot
    O09108, Q60844
    UniProtKB/TrEMBL
    G3X9G6
    Related
    ENSMUSP00000072276.5, ENSMUST00000072453.8
    Conserved Domains (1) summary
    smart00068
    Location:25131
    GHB; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    45070370..45071278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)