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Tpst2 protein-tyrosine sulfotransferase 2 [ Mus musculus (house mouse) ]

Gene ID: 22022, updated on 9-Dec-2024

Summary

Official Symbol
Tpst2provided by MGI
Official Full Name
protein-tyrosine sulfotransferase 2provided by MGI
Primary source
MGI:MGI:1309516
See related
Ensembl:ENSMUSG00000029344 AllianceGenome:MGI:1309516
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
grm; grt; D5Ucla3; Tango13b
Summary
Enables protein-tyrosine sulfotransferase activity. Involved in peptidyl-tyrosine sulfation. Acts upstream of or within fusion of sperm to egg plasma membrane involved in single fertilization and prevention of polyspermy. Is active in Golgi lumen and trans-Golgi network. Orthologous to human TPST2 (tyrosylprotein sulfotransferase 2). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Broad expression in genital fat pad adult (RPKM 79.3), adrenal adult (RPKM 73.7) and 25 other tissues See more
Orthologs
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Genomic context

See Tpst2 in Genome Data Viewer
Location:
5 F; 5 54.65 cM
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (112424548..112463222)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (112276682..112315356)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene crystallin, beta A4 Neighboring gene STARR-positive B cell enhancer ABC_E6365 Neighboring gene crystallin, beta B1 Neighboring gene STARR-positive B cell enhancer ABC_E6366 Neighboring gene STARR-positive B cell enhancer ABC_E1685 Neighboring gene predicted gene, 46941 Neighboring gene CapStarr-seq enhancer MGSCv37_chr5:112714594-112714795 Neighboring gene STARR-positive B cell enhancer ABC_E3600 Neighboring gene tuftelin interacting protein 11 Neighboring gene SRR1 domain containing Neighboring gene coiled-coil domain containing 121, retrogene 3 Neighboring gene HPS4, biogenesis of lysosomal organelles complex 3 subunit 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
growth retarded
GeneReviews: Not available

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein homodimerization activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-tyrosine sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein-tyrosine sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein-tyrosine sulfotransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables protein-tyrosine sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein-tyrosine sulfotransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in Golgi lumen IDA
Inferred from Direct Assay
more info
PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
is_active_in trans-Golgi network IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in trans-Golgi network ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
protein-tyrosine sulfotransferase 2
Names
TPST-2
tyrosylprotein sulfotransferase 2
NP_001313519.2
NP_001361637.1
NP_001361638.1
NP_033445.3
XP_006534912.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001326590.2NP_001313519.2  protein-tyrosine sulfotransferase 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 4. Variants 1-4 all encode the same protein.
    Source sequence(s)
    AC123795, AC123848
    UniProtKB/Swiss-Prot
    O88856, Q8CBA8
    UniProtKB/TrEMBL
    Q3UDH0
    Related
    ENSMUSP00000071399.3, ENSMUST00000071455.7
    Conserved Domains (1) summary
    pfam13469
    Location:70261
    Sulfotransfer_3; Sulfotransferase family
  2. NM_001374708.1NP_001361637.1  protein-tyrosine sulfotransferase 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 4. Variants 1-4 all encode the same protein.
    Source sequence(s)
    AC123848
    UniProtKB/Swiss-Prot
    O88856, Q8CBA8
    UniProtKB/TrEMBL
    Q3UDH0
    Conserved Domains (1) summary
    pfam13469
    Location:70261
    Sulfotransfer_3; Sulfotransferase family
  3. NM_001374709.1NP_001361638.1  protein-tyrosine sulfotransferase 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) represents the longest transcript. Variants 1-4 all encode the same protein.
    Source sequence(s)
    AC123848
    UniProtKB/Swiss-Prot
    O88856, Q8CBA8
    UniProtKB/TrEMBL
    Q3UDH0
    Conserved Domains (1) summary
    pfam13469
    Location:70261
    Sulfotransfer_3; Sulfotransferase family
  4. NM_009419.5NP_033445.3  protein-tyrosine sulfotransferase 2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) differs in the 5' UTR compared to variant 4. Variants 1-4 all encode the same protein.
    Source sequence(s)
    AC123795, AC123848
    UniProtKB/Swiss-Prot
    O88856, Q8CBA8
    UniProtKB/TrEMBL
    Q3UDH0
    Related
    ENSMUSP00000031287.6, ENSMUST00000031287.12
    Conserved Domains (1) summary
    pfam13469
    Location:70261
    Sulfotransfer_3; Sulfotransferase family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    112424548..112463222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006534849.5XP_006534912.1  protein-tyrosine sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    Q3UDH0
    Conserved Domains (1) summary
    pfam13469
    Location:135326
    Sulfotransfer_3; Sulfotransferase family

RNA

  1. XR_389265.3 RNA Sequence

  2. XR_003955618.2 RNA Sequence

  3. XR_003955617.2 RNA Sequence