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FDPSP4 farnesyl diphosphate synthase pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 2228, updated on 17-Sep-2024

Summary

Official Symbol
FDPSP4provided by HGNC
Official Full Name
farnesyl diphosphate synthase pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:3635
See related
Ensembl:ENSG00000254793 AllianceGenome:HGNC:3635
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FPSL4; CHR39B; FDPSL4
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Genomic context

See FDPSP4 in Genome Data Viewer
Location:
15q15.2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (42939253..42940404, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (40746384..40747535, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (43231451..43232602, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene TTBK2 antisense RNA 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:43051195-43051957 Neighboring gene tau tubulin kinase 2 Neighboring gene Sharpr-MPRA regulatory region 5629 Neighboring gene keratin 8 pseudogene 50 Neighboring gene H3K27ac hESC enhancer GRCh37_chr15:43181679-43182551 Neighboring gene H3K27ac hESC enhancers GRCh37_chr15:43212294-43212794 and GRCh37_chr15:43212795-43213295 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9308 Neighboring gene ubiquitin protein ligase E3 component n-recognin 1 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr15:43307016-43307895 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6380 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr15:43368903-43369710 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9309 Neighboring gene RPS3A pseudogene 47

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • cholesterol-repressible protein 39B
  • farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) pseudogene
  • farnesyl diphosphate synthase-like 4 (farnesyl pyrophosphate synthetase-like 4)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_007445.4 

    Range
    101..1252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    42939253..42940404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    40746384..40747535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)