U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rep replication associated Protein [ Catharanthus yellow mosaic virus ]

Gene ID: 22647536, updated on 18-Aug-2023

Summary

Go to the top of the page Help
Gene symbol
Rep
Gene description
replication associated Protein
Locus tag
SB88_gp5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Catharanthus yellow mosaic virus (isolate: DR-151, nat-host: Duranta repens)
Lineage
Viruses; ssDNA viruses; Geminiviridae; Begomovirus; unclassified Begomovirus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
clone: GMT-38
Sequence:
NC_025964.1 (1551..2609, complement)

NC_025964.1Genomic Context describing neighboring genes Neighboring gene pre coat protein Neighboring gene Coat Protein Neighboring gene Replication Enhancer Protein Neighboring gene Transactivator Protein Neighboring gene C4 protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_025964.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
replication associated Protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_025964.1 Reference assembly

    Range
    1551..2609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009112876.1 replication associated Protein [Catharanthus yellow mosaic virus]

    See identical proteins and their annotated locations for YP_009112876.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0A8LE96, A0A1L7RIE5, A0A224L1E7
    Conserved Domains (2) summary
    pfam00799
    Location:7 → 119
    Gemini_AL1; Geminivirus Rep catalytic domain
    pfam08283
    Location:126 → 230
    Gemini_AL1_M; Geminivirus rep protein central domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases