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Gm17250 predicted gene, 17250 [ Mus musculus (house mouse) ]

Gene ID: 228025, updated on 17-Aug-2024

Summary

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Official Symbol
Gm17250provided by MGI
Official Full Name
predicted gene, 17250provided by MGI
Primary source
MGI:MGI:4936884
See related
AllianceGenome:MGI:4936884
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm559
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm17250 in Genome Data Viewer
Location:
2 C2; 2 42.79 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (71564854..71580884, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (71734510..71750505, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04799 Neighboring gene predicted gene, 36909 Neighboring gene STARR-seq mESC enhancer starr_04800 Neighboring gene STARR-seq mESC enhancer starr_04801 Neighboring gene pluripotency associated transcript 26 Neighboring gene STARR-seq mESC enhancer starr_04804 Neighboring gene ribosomal protein S7 pseudogene Neighboring gene integrin alpha 6 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:71652164-71652396

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
  2. A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Hansen J, et al. Proc Natl Acad Sci U S A, 2003 Aug 19. PMID 12904583, Free PMC Article
  3. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
  4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    71564854..71580884 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_866412.2 RNA Sequence

  2. XR_866414.2 RNA Sequence

  3. XR_866415.2 RNA Sequence

  4. XR_866413.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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