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ZOD1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 23547382, updated on 11-Sep-2024

Summary

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Official Symbol
ZOD1
Primary source
SGD:S000077071
Locus tag
YNCM0003W
See related
AllianceGenome:SGD:S000077071
Gene type
ncRNA
RNA name
other
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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Genomic context

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Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (91970..92027)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene proteasome core particle subunit alpha 2 Neighboring gene ribonuclease P Neighboring gene SCF ubiquitin ligase complex subunit UFO1 Neighboring gene cytochrome-b5 reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Retrotransposon profiling of RNA polymerase III initiation sites. Qi X, et al. Genome Res, 2012 Apr. PMID 22287102, Free PMC Article
  2. Nucleosome depletion activates poised RNA polymerase III at unconventional transcription sites in Saccharomyces cerevisiae. Guffanti E, et al. J Biol Chem, 2006 Sep 29. PMID 16816405
  3. Genome-wide occupancy profile of the RNA polymerase III machinery in Saccharomyces cerevisiae reveals loci with incomplete transcription complexes. Moqtaderi Z, et al. Mol Cell Biol, 2004 May. PMID 15121834, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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  • tDNA relic, ancient tDNA for tRNA-Ile; weakly transcribed by RNA polymerase III; located upstream of UFO1; associated with components of the Pol III machinery: Tfc4p, Brf1p, Bdp1, and Rpc34p

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    91970..92027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_132235.1 RNA Sequence

    Status: REVIEWED

Gene LinkOut

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Research Materials