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Tspyl3 TSPY-like 3 [ Mus musculus (house mouse) ]

Gene ID: 241732, updated on 2-Nov-2024

Summary

Official Symbol
Tspyl3provided by MGI
Official Full Name
TSPY-like 3provided by MGI
Primary source
MGI:MGI:2139328
See related
Ensembl:ENSMUSG00000074671 AllianceGenome:MGI:2139328
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm36
Summary
Predicted to enable chromatin binding activity and histone binding activity. Predicted to be located in chromatin. Predicted to be active in nucleus. Orthologous to human TSPY26P (testis specific protein Y-linked 26, pseudogene). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Tspyl3 in Genome Data Viewer
Location:
2 H1; 2 75.41 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (153064290..153067361, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (153222370..153225441, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene hemopoietic cell kinase Neighboring gene STARR-positive B cell enhancer ABC_E1605 Neighboring gene STARR-seq mESC enhancer starr_06087 Neighboring gene STARR-seq mESC enhancer starr_06088 Neighboring gene transmembrane 9 superfamily member 4 Neighboring gene protein transport protein Sec61 subunit gamma pseudogene Neighboring gene pleiomorphic adenoma gene-like 2 Neighboring gene protein O-fucosyltransferase 1 Neighboring gene STARR-positive B cell enhancer ABC_E7868 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:153088886-153089039

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • MGC58351

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198617.2NP_941019.2  TSPY-like 3

    See identical proteins and their annotated locations for NP_941019.2

    Status: VALIDATED

    Source sequence(s)
    AK148882, BY243312, CJ313147
    Consensus CDS
    CCDS16907.2
    UniProtKB/TrEMBL
    Q3TIT2, Q3UYP3
    Related
    ENSMUSP00000096799.3, ENSMUST00000099194.4
    Conserved Domains (1) summary
    cl08298
    Location:174305
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    153064290..153067361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)