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Olfml1 olfactomedin-like 1 [ Mus musculus (house mouse) ]

Gene ID: 244198, updated on 9-Dec-2024

Summary

Official Symbol
Olfml1provided by MGI
Official Full Name
olfactomedin-like 1provided by MGI
Primary source
MGI:MGI:2679264
See related
Ensembl:ENSMUSG00000051041 AllianceGenome:MGI:2679264
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ONT2; mONT2; MVAL564; 6720478C22
Summary
Orthologous to human OLFML1 (olfactomedin like 1). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Broad expression in subcutaneous fat pad adult (RPKM 12.9), placenta adult (RPKM 10.3) and 22 other tissues See more
Orthologs
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Genomic context

See Olfml1 in Genome Data Viewer
Location:
7 E3; 7 57.21 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (107166640..107190572)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (107567433..107591365)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene Neighboring gene synaptotagmin IX Neighboring gene STARR-seq mESC enhancer starr_19764 Neighboring gene STARR-positive B cell enhancer ABC_E8198 Neighboring gene STARR-positive B cell enhancer ABC_E1352 Neighboring gene STARR-seq mESC enhancer starr_19765 Neighboring gene PTPRF interacting protein, binding protein 2 (liprin beta 2) Neighboring gene STARR-seq mESC enhancer starr_19766 Neighboring gene STARR-positive B cell enhancer mm9_chr7:114807884-114808185 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:114846576-114846777 Neighboring gene STARR-seq mESC enhancer starr_19769 Neighboring gene STARR-seq mESC enhancer starr_19770 Neighboring gene cytochrome b5 reductase 2 Neighboring gene ovochymase 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 
  • Targeted (1)  1 citation

General protein information

Preferred Names
olfactomedin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172907.3NP_766495.1  olfactomedin-like protein 1 precursor

    See identical proteins and their annotated locations for NP_766495.1

    Status: VALIDATED

    Source sequence(s)
    AK032948, AK140277, CJ064708
    Consensus CDS
    CCDS52354.1
    UniProtKB/TrEMBL
    A0A5F8MPM3, Q8BSH2
    Related
    ENSMUSP00000114029.2, ENSMUST00000120990.2
    Conserved Domains (1) summary
    cl02549
    Location:145227
    OLF; Olfactomedin-like domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    107166640..107190572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)