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Miox myo-inositol oxygenase [ Rattus norvegicus (Norway rat) ]

Gene ID: 252899, updated on 17-Aug-2024

Summary

Official Symbol
Mioxprovided by RGD
Official Full Name
myo-inositol oxygenaseprovided by RGD
Primary source
RGD:628739
See related
EnsemblRapid:ENSRNOG00000008694 AllianceGenome:RGD:628739
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RSOR; Aldrl6
Summary
Enables NADP binding activity. Predicted to be involved in inositol catabolic process. Predicted to be located in cytoplasm and inclusion body. Orthologous to human MIOX (myo-inositol oxygenase). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward (RPKM 5905.9) See more
Orthologs
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Genomic context

Location:
7q34
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (122284660..122287158)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (120405031..120407529)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (130308707..130311205)

Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene SET binding factor 1 Neighboring gene uncharacterized LOC102549998 Neighboring gene adrenomedullin 2 Neighboring gene U6 spliceosomal RNA Neighboring gene lipase maturation factor 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables NADP binding IDA
Inferred from Direct Assay
more info
PubMed 
enables aldo-keto reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 
enables aldo-keto reductase (NADPH) activity ISO
Inferred from Sequence Orthology
more info
 
enables aldo-keto reductase (NADPH) activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 
enables ferric iron binding ISO
Inferred from Sequence Orthology
more info
 
enables ferric iron binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables inositol oxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables inositol oxygenase activity IEA
Inferred from Electronic Annotation
more info
 
enables inositol oxygenase activity ISO
Inferred from Sequence Orthology
more info
 
enables inositol oxygenase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on NAD(P)H IEA
Inferred from Electronic Annotation
more info
 
enables oxidoreductase activity, acting on NAD(P)H ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in inositol catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in inositol catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in inositol catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in inositol catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in inclusion body ISO
Inferred from Sequence Orthology
more info
 
located_in inclusion body ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
inositol oxygenase
Names
MI oxygenase
aldehyde reductase (aldose reductase) like 6
aldehyde reductase-like 6
kidney-specific protein 32
renal-specific oxido-reductase
renal-specific oxidoreductase
NP_665714.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_145771.2NP_665714.2  inositol oxygenase

    See identical proteins and their annotated locations for NP_665714.2

    Status: PROVISIONAL

    Source sequence(s)
    BC078840
    UniProtKB/Swiss-Prot
    Q5S8C8, Q68G06, Q99PN7, Q9QXN4
    UniProtKB/TrEMBL
    A0A0H2UHH0, A6K7L4
    Related
    ENSRNOP00000011941.5, ENSRNOT00000011941.7
    Conserved Domains (1) summary
    pfam05153
    Location:37285
    MIOX; Myo-inositol oxygenase

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086025.1 Reference GRCr8

    Range
    122284660..122287158
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)