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hpz1 zf-PARP type zinc finger protein Hpz1, implicated in DNA repair [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540460, updated on 18-Sep-2024

Summary

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Official Symbol
hpz1
Official Full Name
zf-PARP type zinc finger protein Hpz1, implicated in DNA repair
Primary source
PomBase:SPBC2A9.07c
Locus tag
SPOM_SPBC2A9.07C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See hpz1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003423.3 (2958679..2960159, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative transport protein Tvp23 Neighboring gene ncRNA Neighboring gene ditrans,polycis-decaprenylcistransferase Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SNARE protein Sec22

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hpz1 modulates the G1-S transition in fission yeast. Bøe CA, et al. PLoS One, 2012. PMID 22970243, Free PMC Article
  2. Predicting the fission yeast protein interaction network. Pancaldi V, et al. G3 (Bethesda), 2012 Apr. PMID 22540037, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables DNA binding ISM
Inferred from Sequence Model
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion HDA PubMed 
is_active_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
zf-PARP type zinc finger protein Hpz1, implicated in DNA repair

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    2958679..2960159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022135.4 → NP_596216.3  zf-PARP type zinc finger protein Hpz1, implicated in DNA repair [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596216.3

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7K9
    Conserved Domains (1) summary
    pfam00645
    Location:11 → 94
    zf-PARP; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
Nucleotide Protein
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