U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

csc2 FAR complex subunit Csc2 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540495, updated on 22-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
csc2
Gene description
FAR complex subunit Csc2
Locus tag
SPOM_SPBC27B12.04C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
far11
Old locus tag
SPBC27B12.04c
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See csc2 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (1326004..1328592, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene protein Mis19 Neighboring gene C-5 sterol desaturase Erg32 Neighboring gene WD repeat protein Crt10, involved in ribosomal RNA decay Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene pig-O family ethanolamine phosphate transferase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Functional repurposing revealed by comparing S. pombe and S. cerevisiae genetic interactions. Frost A, et al. Cell, 2012 Jun 8. PMID 22682253, Free PMC Article
  2. SIN-inhibitory phosphatase complex promotes Cdc11p dephosphorylation and propagates SIN asymmetry in fission yeast. Singh NS, et al. Curr Biol, 2011 Dec 6. PMID 22119525, Free PMC Article
  3. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in asymmetric protein localization to old mitotic spindle pole body IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in negative regulation of septation initiation signaling IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of FAR/SIN/STRIPAK complex EXP
Inferred from Experiment
more info
 PubMed 
part_of FAR/SIN/STRIPAK complex IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in fungal-type vacuole HDA PubMed 
is_active_in mitotic spindle pole body EXP
Inferred from Experiment
more info
 PubMed 
is_active_in nuclear envelope IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in old mitotic spindle pole body IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
FAR complex subunit Csc2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    1326004..1328592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021447.3 → NP_595536.1  FAR complex subunit Csc2 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595536.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13665
    Conserved Domains (2) summary
    pfam07923
    Location:30 → 308
    N1221; N1221-like protein
    pfam11882
    Location:378 → 769
    DUF3402; Domain of unknown function (DUF3402)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials