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srp101 signal recognition particle receptor alpha subunit Srp101 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540909, updated on 18-Sep-2024

Summary

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Official Symbol
srp101
Official Full Name
signal recognition particle receptor alpha subunit Srp101
Primary source
PomBase:SPBC3B9.03
Locus tag
SPOM_SPBC3B9.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See srp101 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (3993391..3995471)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Hsp70 nucleotide exchange factor Neighboring gene splicing factor Cwf28 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene methyltransferase Neighboring gene mRNA-decapping complex regulatory subunit Dcp1 Neighboring gene protein TIM chaperone

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. Transcription and RNA-processing in fission yeast mitochondria. Schäfer B, et al. RNA, 2005 May. PMID 15811919, Free PMC Article
  3. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  4. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe: highly homologous introns are inserted at the same position of the otherwise less conserved cox1 genes in Schizosaccharomyces pombe and Aspergillus nidulans. Lang BF. EMBO J, 1984 Sep. PMID 6092057, Free PMC Article
  5. The mitochondrial genome of the fission yeast Schizosaccharomyces pombe. The cytochrome b gene has an intron closely related to the first two introns in the Saccharomyces cerevisiae cox1 gene. Lang BF, et al. J Mol Biol, 1985 Aug 5. PMID 4046021

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables GTP binding ISM
Inferred from Sequence Model
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables signal recognition particle binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane ISO
Inferred from Sequence Orthology
more info
  
involved_in intracellular protein transport NAS
Non-traceable Author Statement
more info
  
involved_in protein targeting to ER IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nucleus HDA PubMed 
part_of signal recognition particle receptor complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
signal recognition particle receptor alpha subunit Srp101

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    3993391..3995471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001022582.3 → NP_596660.1  signal recognition particle receptor alpha subunit Srp101 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_596660.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O43032
    Conserved Domains (4) summary
    smart00962
    Location:342 → 547
    SRP54; SRP54-type protein, GTPase domain
    smart00963
    Location:249 → 320
    SRP54_N; SRP54-type protein, helical bundle domain
    TIGR00064
    Location:264 → 545
    ftsY; signal recognition particle-docking protein FtsY
    pfam04086
    Location:31 → 228
    SRP-alpha_N; Signal recognition particle, alpha subunit, N-terminal
Nucleotide Protein
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