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utp8 protein Utp8 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541440, updated on 18-Sep-2024

Summary

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Official Symbol
utp8
Official Full Name
protein Utp8
Primary source
PomBase:SPAC1565.05
Locus tag
SPOM_SPAC1565.05
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See utp8 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1297169..1299830)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene MAPK cascade adaptor protein Ste4 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GTPase Spg1 Neighboring gene ncRNA Neighboring gene cullin-associated NEDD8-dissociated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814
  2. Proteomic profiling and functional characterization of post-translational modifications of the fission yeast RNA exosome. Telekawa C, et al. Nucleic Acids Res, 2018 Nov 30. PMID 30321377, Free PMC Article
  3. Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. Egan ED, et al. RNA, 2014 Jun. PMID 24713849, Free PMC Article
  4. SR protein kinases promote splicing of nonconsensus introns. Lipp JJ, et al. Nat Struct Mol Biol, 2015 Aug. PMID 26167880
  5. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables snoRNA binding ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of small-subunit processome IDA
Inferred from Direct Assay
more info
 PubMed 
part_of t-UTP complex ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
protein Utp8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1297169..1299830
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018714.3 → NP_593284.1  protein Utp8 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593284.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9P3A9
    Conserved Domains (1) summary
    pfam10395
    Location:1 → 773
    Utp8; Utp8 family
Nucleotide Protein
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