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mse1 glutamyl--tRNA (Glu) ligase Mse1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543394, updated on 22-Jun-2024

Summary

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Gene symbol
mse1
Gene description
glutamyl--tRNA (Glu) ligase Mse1
Locus tag
SPOM_SPAPB1A10.11C
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
ers2
Old locus tag
SPAPB1A10.11c
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Genomic context

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See mse1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (1882300..1884148, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene antiparallel microtubule cross-linking factor Ase1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GTPase Ypt71 Neighboring gene ncRNA Neighboring gene D-arabinono-1,4-lactone oxidase Neighboring gene ncRNA Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Glutamyl tRNA synthetases and glutamic acid induce sexual differentiation of Schizosaccharomyces pombe. Paul SK, et al. Biosci Biotechnol Biochem, 2009 Jun. PMID 19502729
  2. A large complex mediated by Moc1, Moc2 and Cpc2 regulates sexual differentiation in fission yeast. Paul SK, et al. FEBS J, 2009 Sep. PMID 19682301
  3. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  4. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding ISM
Inferred from Sequence Model
more info
  
enables glutamate-tRNA ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in glutamyl-tRNA aminoacylation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in mitochondrial matrix IC
Inferred by Curator
more info
  
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
glutamyl--tRNA (Glu) ligase Mse1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    1882300..1884148 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018959.3 → NP_593525.1  glutamyl--tRNA (Glu) ligase Mse1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593525.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9HDX9
    Conserved Domains (2) summary
    cd00808
    Location:34 → 355
    GluRS_core; catalytic core domain of discriminating glutamyl-tRNA synthetase
    PRK01406
    Location:34 → 504
    gltX; glutamyl-tRNA synthetase; Reviewed
Nucleotide Protein
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