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P483_33 DNA ligase [ Escherichia phage P483 ]

Gene ID: 26627760, updated on 8-Jan-2023

Summary

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Gene symbol
P483_33
Gene description
DNA ligase
Locus tag
P483_33
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage P483 (nat-host: Escherichia coli DE48)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Studiervirinae; Berlinvirus; Berlinvirus P483
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Genomic context

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Sequence:
NC_028822.1 (29023..30105, complement)

NC_028822.1Genomic Context describing neighboring genes Neighboring gene nucleotide kinase Neighboring gene BC10 family protein Neighboring gene hypothetical protein Neighboring gene dGTPase inhibitor; target for F exclusion Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028822.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Isolation, genome sequencing and functional analysis of two T7-like coliphages of avian pathogenic Escherichia coli. Chen M, et al. Gene, 2016 May 10. PMID 26828615

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
DNA ligase
YP_009200615.1
  • DNA ligase, phage-associated

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_028822.1 Reference assembly

    Range
    29023..30105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009200615.1 DNA ligase [Escherichia phage P483]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D3QHC9
    Conserved Domains (3) summary
    PHA00454
    Location:2 → 352
    PHA00454; ATP-dependent DNA ligase
    cl08424
    Location:328 → 346
    OBF_DNA_ligase_family; The Oligonucleotide/oligosaccharide binding (OB)-fold domain is a DNA-binding module that is part of the catalytic core unit of ATP dependent DNA ligases
    cl12015
    Location:9 → 249
    Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases