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AVU76_gp44 integrase [ Synechococcus phage S-CBP42 ]

Gene ID: 26646401, updated on 7-Jan-2023

Summary

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Gene symbol
AVU76_gp44
Gene description
integrase
Locus tag
AVU76_gp44
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Synechococcus phage S-CBP42 (nat-host: Synechococcus sp. WH7803)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Aegirvirus; Aegirvirus SCBP42
Old locus tag
S-CBP42_0044
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Genomic context

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Sequence:
NC_029031.1 (35401..36249)

NC_029031.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ssDNA binding protein Neighboring gene endonuclease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029031.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Genomic and Phylogenomic Analyses Reveal a Conserved Core Genome Shared by Estuarine and Oceanic Cyanopodoviruses. Huang S, et al. PLoS One, 2015. PMID 26569403, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
integrase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_029031.1 Reference assembly

    Range
    35401..36249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009220228.1 integrase [Synechococcus phage S-CBP42]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8EYF8
    Conserved Domains (1) summary
    cd00796
    Location:108 → 268
    INT_Rci_Hp1_C; Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases