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AVU76_gp53 exonuclease [ Synechococcus phage S-CBP42 ]

Gene ID: 26646410, updated on 7-Jan-2023

Summary

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Gene symbol
AVU76_gp53
Gene description
exonuclease
Locus tag
AVU76_gp53
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Synechococcus phage S-CBP42 (nat-host: Synechococcus sp. WH7803)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Aegirvirus; Aegirvirus SCBP42
Old locus tag
S-CBP42_0053
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Genomic context

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Sequence:
NC_029031.1 (42138..42866)

NC_029031.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene primase/helicase Neighboring gene hypothetical protein Neighboring gene DNA polymerase Neighboring gene endonuclease Neighboring gene hypothetical protein Neighboring gene nucleotide kinase Neighboring gene MazG nucleotide pyrophosphohydrolase Neighboring gene class I ribonucleotide reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029031.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative Genomic and Phylogenomic Analyses Reveal a Conserved Core Genome Shared by Estuarine and Oceanic Cyanopodoviruses. Huang S, et al. PLoS One, 2015. PMID 26569403, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
exonuclease

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_029031.1 Reference assembly

    Range
    42138..42866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009220236.1 exonuclease [Synechococcus phage S-CBP42]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8EYG3
    Conserved Domains (3) summary
    PHA00439
    Location:2 → 242
    PHA00439; exonuclease
    cl14812
    Location:6 → 149
    PIN_SF; PIN (PilT N terminus) domain: Superfamily
    cl22433
    Location:167 → 192
    H3TH_StructSpec-5'-nucleases; H3TH domains of structure-specific 5' nucleases (or flap endonuclease-1-like) involved in DNA replication, repair, and recombination
Nucleotide Protein
Heading Accession and Version

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