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PHICD146_20016 tail length tape measure protein [ Clostridium phage phiCD146 ]

Gene ID: 26647046, updated on 8-Jan-2023

Summary

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Gene symbol
PHICD146_20016
Gene description
tail length tape measure protein
Locus tag
PHICD146_20016
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Clostridium phage phiCD146 (nat-host: Clostridium difficile)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Leicestervirus; Leicestervirus CD146
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Genomic context

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Sequence:
NC_028958.1 (10929..16079)

NC_028958.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene bacterioGp15 family protein Neighboring gene DUF4236 domain-containing protein Neighboring gene distal tail protein Dit Neighboring gene tail protein with peptidase activity

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028958.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
tail length tape measure protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_028958.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009214144.1 tail length tape measure protein [Clostridium phage phiCD146]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0A8WET6
    Conserved Domains (7) summary
    COG1340
    Location:735 → 1030
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    COG5280
    Location:25 → 431
    YqbO; Phage-related minor tail protein [Mobilome: prophages, transposons]
    COG5412
    Location:1133 → 1618
    COG5412; Phage-related protein [Mobilome: prophages, transposons]
    pfam10145
    Location:89 → 286
    PhageMin_Tail; Phage-related minor tail protein
    cd16269
    Location:919 → 929
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:850 → 944
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl23765
    Location:783 → 886
    iSH2_PI3K_IA_R; Inter-Src homology 2 (iSH2) helical domain of Class IA Phosphoinositide 3-kinase Regulatory subunits
Nucleotide Protein
Heading Accession and Version

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