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GNAL G protein subunit alpha L [ Homo sapiens (human) ]

Gene ID: 2774, updated on 2-Nov-2024

Summary

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Official Symbol
GNALprovided by HGNC
Official Full Name
G protein subunit alpha Lprovided by HGNC
Primary source
HGNC:HGNC:4388
See related
Ensembl:ENSG00000141404 MIM:139312; AllianceGenome:HGNC:4388
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HG1O; DYT25
Summary
This gene encodes a stimulatory G protein alpha subunit which mediates odorant signaling in the olfactory epithelium. This protein couples dopamine type 1 receptors and adenosine A2A receptors and is widely expressed in the central nervous system. Mutations in this gene have been associated with dystonia 25 and this gene is located in a susceptibility region for bipolar disorder and schizophrenia. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2013]
Expression
Ubiquitous expression in brain (RPKM 7.2), prostate (RPKM 5.5) and 24 other tissues See more
Orthologs
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Genomic context

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See GNAL in Genome Data Viewer
Location:
18p11.21
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (11689264..11885685)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (11851607..12048391)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (11689263..11885684)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene nuclear pore complex interacting protein family member B1, pseudogene Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_47746 Neighboring gene microRNA 7153 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:11689154-11689654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:11696745-11697246 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr18:11714059-11714618 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:11732672-11733280 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:11737507-11738276 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:11775153-11775652 Neighboring gene ASNS pseudogene 6 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:11796263-11796399 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13095 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13096 Neighboring gene Sharpr-MPRA regulatory region 95 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:11856862-11858061 Neighboring gene uncharacterized LOC124904251 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:11861344-11862250 Neighboring gene ReSE screen-validated silencer GRCh37_chr18:11875590-11875801 Neighboring gene uncharacterized LOC124904252 Neighboring gene charged multivesicular body protein 1B Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9301 Neighboring gene uncharacterized LOC101927511 Neighboring gene metallophosphoesterase 1 Neighboring gene CRISPRi-validated cis-regulatory element chr18.397 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:11951641-11952330 Neighboring gene Sharpr-MPRA regulatory region 7933 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13098 Neighboring gene inositol monophosphatase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. cases extend and support prior limited literature that suggested that cervical dystonia from GNAL mutations may significantly improve with GPi deep brain stimulation
    Title: Deep Brain Stimulation in Isolated Dystonia With a GNAL Mutation.
  2. GNAL mutation may represent one of the rare causative genetic factors of isolated laryngeal dystonia.
    Title: GNAL mutation in isolated laryngeal dystonia.
  3. GNAL mutations are not a common cause of dystonia in the Brazilian population
    Title: Screening of GNAL variants in Brazilian patients with isolated dystonia reveals a novel mutation with partial loss of function.
  4. We report a novel GNAL mutation in Italian family with adult-onset, dominantly-inherited dystonia
    Title: Novel GNAL mutation with intra-familial clinical heterogeneity: Expanding the phenotype.
  5. Mutations in the GNAL gene may not be a common cause of isolated dystonia in the Chinese population.
    Title: Mutations in GNAL gene in 214 cases with isolated dystonia.
  6. This study demonstrated that Mutations in GNAL may cause Dystonia.
    Title: Mutations in ANO3 and GNAL gene in thirty-three isolated dystonia families.
  7. identified two novel GNAL mutations: one heterozygous missense variant in GNAL exon 4, c.289A>G.
    Title: Novel GNAL mutations in two German patients with sporadic dystonia.
  8. The findings of this study further support GNAL as causative gene in adult-onset isolated dystonia.
    Title: Screening of mutations in GNAL in sporadic dystonia patients.
  9. This study identified a novel likely disease-causing GNAL mutation in a Serbian patient with cervical dystonia and a classical DYT25 phenotype.
    Title: De novo mutation in the GNAL gene causing seemingly sporadic dystonia in a Serbian patient.
  10. Primary dystonia in the Amish-Mennonites is genetically diverse and includes not only the THAP1 indel founder mutation but also different mutations in THAP1 and GNAL as well as the TOR1A GAG deletion.
    Title: Heterogeneity in primary dystonia: lessons from THAP1, GNAL, and TOR1A in Amish-Mennonites.
Submit: New GeneRIF Correction See all GeneRIFs (28)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Associated conditions

Description Tests
Dystonia 25
MedGen: C4304670 OMIM: 615073 GeneReviews: Hereditary Dystonia Overview, DYT-GNAL
not available

EBI GWAS Catalog

Description
Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval.
EBI GWAS Catalog

Variation

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See Variation Viewer (GRCh37.p13)

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables G protein-coupled receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables G-protein beta/gamma-subunit complex binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in adenylate cyclase-activating dopamine receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in signal transduction TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in extracellular exosome HDA PubMed 
part_of heterotrimeric G-protein complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane TAS
Traceable Author Statement
more info
  

General protein information

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Preferred Names
guanine nucleotide-binding protein G(olf) subunit alpha
Names
adenylate cyclase-stimulating G alpha protein, olfactory type
guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide, olfactory type
heterotrimeric guanine nucleotide-binding protein 1O

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033866.1 RefSeqGene

    Range
    5250..201671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001142339.3 → NP_001135811.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform 2

    See identical proteins and their annotated locations for NP_001135811.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and initiates translation at an alternate start codon, compared to variant 1. Variants 3 and 4 encode the same isoform (2), which is shorter and has a distinct N-terminus, compared to isoform 1.
    Source sequence(s)
    AK290054, AP001269, CB241142
    Consensus CDS
    CCDS11852.1
    UniProtKB/Swiss-Prot
    B7ZA26, P38405, Q86XU3
    UniProtKB/TrEMBL
    A8K1Y9, Q8N2B4
    Related
    ENSP00000269162.4, ENST00000269162.9
    Conserved Domains (1) summary
    cd00066
    Location:43 → 375
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

  2. NM_001261443.2 → NP_001248372.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform 2

    See identical proteins and their annotated locations for NP_001248372.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and initiates translation at an alternate start codon, compared to variant 1. Variants 3 and 4 encode the same isoform (2), which is shorter and has a distinct N-terminus, compared to isoform 1.
    Source sequence(s)
    AK313902, AP001269, CB241142
    Consensus CDS
    CCDS11852.1
    UniProtKB/Swiss-Prot
    B7ZA26, P38405, Q86XU3
    UniProtKB/TrEMBL
    A8K1Y9, Q8N2B4
    Related
    ENSP00000439023.1, ENST00000535121.5
    Conserved Domains (1) summary
    cd00066
    Location:43 → 375
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

  3. NM_001261444.2 → NP_001248373.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform 3

    See identical proteins and their annotated locations for NP_001248373.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) differs in the 5' UTR, lacks a large portion of the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AK316141, AP001269, CB241142
    Consensus CDS
    CCDS58614.1
    UniProtKB/Swiss-Prot
    P38405
    Related
    ENSP00000473600.1, ENST00000602628.1
    Conserved Domains (1) summary
    cd00066
    Location:1 → 168
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

  4. NM_001369387.1 → NP_001356316.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform 2

    Status: REVIEWED

    Source sequence(s)
    AI024119, AP001120, AP001269, BC050021, DA151077, DC414694, L10665
    Consensus CDS
    CCDS11852.1
    UniProtKB/Swiss-Prot
    B7ZA26, P38405, Q86XU3
    UniProtKB/TrEMBL
    A8K1Y9, Q8N2B4
    Related
    ENSP00000408489.2, ENST00000423027.8
    Conserved Domains (1) summary
    cd00066
    Location:43 → 375
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

  5. NM_182978.4 → NP_892023.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform 1

    See identical proteins and their annotated locations for NP_892023.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AP001120, AP001269, BC050021, CB241142
    Consensus CDS
    CCDS11851.1
    UniProtKB/Swiss-Prot
    P38405
    Related
    ENSP00000334051.5, ENST00000334049.11
    Conserved Domains (1) summary
    cd00066
    Location:120 → 452
    G-alpha; Alpha subunit of G proteins (guanine nucleotide binding)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    11689264..11885685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006722324.4 → XP_006722387.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform X1

    Conserved Domains (1) summary
    cl21455
    Location:120 → 240
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    11851607..12048391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054318532.1 → XP_054174507.1  guanine nucleotide-binding protein G(olf) subunit alpha isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_002071.3: Suppressed sequence

    Description
    NM_002071.3: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38405.1 GenPept UniProtKB/Swiss-Prot:P38405

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