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T5.108 replication origin binding [ Escherichia phage T5 ]

Gene ID: 2777687, updated on 13-May-2023

Summary

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Gene symbol
T5.108
Gene description
replication origin binding
Locus tag
T5.108
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia phage T5 (nat-host: Escherichia coli)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Demerecviridae; Markadamsvirinae; Tequintavirus
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Genomic context

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Sequence:
NC_005859.1 (59545..62331)

NC_005859.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene HNH endonuclease Neighboring gene hypothetical protein Neighboring gene helicase Neighboring gene transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005859.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. THE ENZYMOLOGY OF VIRUS-INFECTED BACTERIA. VI. PURIFICATION AND PROPERTIES OF THE DEOXYNUCLEOTIDE KINASE INDUCED BY BACTERIOPHAGE T5. BESSMAN MJ, et al. J Biol Chem, 1965 Jan. PMID 14253449
  2. Virus-induced acquisition of metabolic function. IV. Thymidylate synthetase in thymine-requiring Escherichia coli infected by T2 and T5 bacteriophages. BARNER HD, et al. J Biol Chem, 1959 Nov. PMID 13796860
  3. Purification and characterization of the deoxynucleoside monophosphate kinase of bacteriophage T5. Mikoulinskaia GV, et al. Protein Expr Purif, 2003 Feb. PMID 12597877
  4. Unusually wide co-factor tolerance in a metalloenzyme; divalent metal ions modulate endo-exonuclease activity in T5 exonuclease. Garforth SJ, et al. Nucleic Acids Res, 2001 Jul 1. PMID 11433022, Free PMC Article
  5. Variation in the steady state kinetic parameters of wild type and mutant T5 5'-3'-exonuclease with pH. Protonation of Lys-83 is critical for DNA binding. Pickering TJ, et al. J Biol Chem, 1999 Jun 18. PMID 10364212

See all (75) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
replication origin binding
YP_006936.1
  • identified by match to InterPro domains IPR001005 and IPR001410

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005859.1 Reference assembly

    Range
    59545..62331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_006936.1 replication origin binding [Escherichia phage T5]

    See identical proteins and their annotated locations for YP_006936.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q66LV7, Q6QGH9
    Conserved Domains (1) summary
    pfam02399
    Location:360 → 532
    Herpes_ori_bp; Origin of replication binding protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6QGH9.1

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