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ANIA_04915 Rab family GTPase rabA [ Aspergillus nidulans FGSC A4 ]

Gene ID: 2872716, updated on 25-Apr-2024

Summary

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Gene symbol
ANIA_04915
Gene description
Rab family GTPase rabA
Locus tag
ANIA_04915
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus nidulans FGSC A4 (strain: FGSC A4)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Nidulantes
Old locus tag
AN4915.4; AN4915.2
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Genomic context

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See ANIA_04915 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_066259.1 (562377..563898, complement)

Chromosome III - NC_066259.1Genomic Context describing neighboring genes Neighboring gene protein nudR Neighboring gene ribosomal 40S subunit protein S7 Neighboring gene protein ack Neighboring gene protein phk

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_066259.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The microtubule plus-end localization of Aspergillus dynein is important for dynein-early-endosome interaction but not for dynein ATPase activation. Zhang J, et al. J Cell Sci, 2010 Oct 15. PMID 20876661, Free PMC Article
  2. Long-distance movement of Aspergillus nidulans early endosomes on microtubule tracks. Abenza JF, et al. Traffic, 2009 Jan. PMID 19000168
  3. The p25 subunit of the dynactin complex is required for dynein-early endosome interaction. Zhang J, et al. J Cell Biol, 2011 Jun 27. PMID 21708978, Free PMC Article
  4. Aspergillus RabB Rab5 integrates acquisition of degradative identity with the long distance movement of early endosomes. Abenza JF, et al. Mol Biol Cell, 2010 Aug 1. PMID 20534811, Free PMC Article
  5. Characterization of Aspergillus nidulans RabC/Rab6. Pantazopoulou A, et al. Traffic, 2011 Apr. PMID 21226815

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by AspGD

Function Evidence Code Pubs
enables GTP binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein targeting to vacuole IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in early endosome IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in endocytic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in late endosome IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in late endosome IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Rab family GTPase rabA
XP_662519.1
  • transcript_id=CADANIAT00005485

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_066259.1 Reference assembly

    Range
    562377..563898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_657427.2 → XP_662519.1  TPA: Rab family GTPase rabA [Aspergillus nidulans FGSC A4]

    See identical proteins and their annotated locations for XP_662519.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C8V9F3, Q5B3G5
    Conserved Domains (2) summary
    cd01860
    Location:15 → 211
    Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
    pfam00071
    Location:17 → 212
    Ras; Ras family
Nucleotide Protein
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