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US1 regulatory protein ICP22 [ Suid alphaherpesvirus 1 ]

Gene ID: 2952489, updated on 18-Aug-2023

Summary

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Gene symbol
US1
Gene description
regulatory protein ICP22
Locus tag
SuHV1_gp64
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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Genomic context

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Sequence:
NC_006151.1 (115211..117215)

NC_006151.1Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ubiquitin E3 ligase ICP0 Neighboring gene transcriptional regulator ICP4 Neighboring gene serine/threonine protein kinase US3 Neighboring gene envelope glycoprotein G Neighboring gene envelope glycoprotein D Neighboring gene envelope glycoprotein I

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006151.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 115241-115241 transcriptional initiation site inference = ab initio prediction:NNPP:

polyA_site

  • Loc: 117215-117215 experiment = cDNA sequence in strain TNL

regulatory

  • Loc: 115211-115217 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
  • Loc: 117191-117196 experiment = consistent with mRNA size and sense in strain Ka , inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence

General protein information

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Preferred Names
regulatory protein ICP22

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006151.1 Reference assembly

    Range
    115211..117215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_068383.1 regulatory protein ICP22 [Suid alphaherpesvirus 1]

    See identical proteins and their annotated locations for YP_068383.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P24827
    UniProtKB/TrEMBL
    G3G927, I1WXI4, Q5PP73
    Conserved Domains (1) summary
    pfam02479
    Location:55 → 185
    Herpes_IE68; Herpesvirus immediate early protein
Nucleotide Protein
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