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UL2 uracil-DNA glycosylase [ Suid alphaherpesvirus 1 ]

Gene ID: 2952528, updated on 18-Aug-2023

Summary

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Gene symbol
UL2
Gene description
uracil-DNA glycosylase
Locus tag
SuHV1_gp57
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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Genomic context

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Sequence:
NC_006151.1 (92475..94940, complement)

NC_006151.1Genomic Context describing neighboring genes Neighboring gene tegument protein UL7 Neighboring gene capsid portal protein Neighboring gene helicase-primase helicase subunit Neighboring gene nuclear protein UL4 Neighboring gene protein V57 Neighboring gene nuclear protein UL3 Neighboring gene envelope glycoprotein L Neighboring gene miscRNA Neighboring gene ubiquitin E3 ligase ICP0 Neighboring gene transcriptional regulator ICP4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006151.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization of the pseudorabies virus UL2 gene. Cai MS, et al. Genet Mol Res, 2013 Oct 7. PMID 24114210
  2. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

regulatory

  • Loc: c92480-92475 experiment = consistent with mRNA sizes and sense in strain In-Fh , inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence
  • Loc: c93362-93356 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
  • Loc: c94078-94072 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
  • Loc: c94940-94934 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box

General protein information

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Preferred Names
uracil-DNA glycosylase
YP_068375.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006151.1 Reference assembly

    Range
    92475..94940 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_068375.1 uracil-DNA glycosylase [Suid alphaherpesvirus 1]

    See identical proteins and their annotated locations for YP_068375.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P52507
    UniProtKB/TrEMBL
    G3G8V0, G3G915, Q5PPA4
    Conserved Domains (1) summary
    TIGR00628
    Location:100 → 308
    ung; uracil-DNA glycosylase
Nucleotide Protein
Heading Accession and Version

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