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UL20 envelope protein UL20 [ Suid alphaherpesvirus 1 ]

Gene ID: 2952542, updated on 18-Aug-2023

Summary

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Gene symbol
UL20
Gene description
envelope protein UL20
Locus tag
SuHV1_gp38
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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Genomic context

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Sequence:
NC_006151.1 (66121..66658)

NC_006151.1Genomic Context describing neighboring genes Neighboring gene capsid scaffold protein Neighboring gene capsid maturation protease Neighboring gene DNA packaging tegument protein UL25 Neighboring gene nuclear protein UL24 Neighboring gene thymidine kinase Neighboring gene envelope glycoprotein H Neighboring gene tegument protein UL21 Neighboring gene major capsid protein Neighboring gene capsid triplex subunit 2 Neighboring gene DNA packaging terminase subunit 1 Neighboring gene DNA packaging tegument protein UL17 Neighboring gene tegument protein UL16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006151.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 66151-66151 transcriptional initiation site inference = ab initio prediction:NNPP:

regulatory

  • Loc: 66121-66127 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
  • Loc: 66652-66658 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box
  • Loc: 66653-66658 inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence

General protein information

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Preferred Names
envelope protein UL20

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006151.1 Reference assembly

    Range
    66121..66658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_068355.1 envelope protein UL20 [Suid alphaherpesvirus 1]

    See identical proteins and their annotated locations for YP_068355.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q00702
    UniProtKB/TrEMBL
    A0A142I9U9, Q04531, Q5PP94
    Conserved Domains (1) summary
    pfam04544
    Location:21 → 160
    Herpes_UL20; Herpesvirus egress protein UL20
Nucleotide Protein
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