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US1 regulatory protein ICP22 [ Suid alphaherpesvirus 1 ]

Gene ID: 2952551, updated on 18-Aug-2023

Summary

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Gene symbol
US1
Gene description
regulatory protein ICP22
Locus tag
SuHV1_gp73
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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Genomic context

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Sequence:
NC_006151.1 (127387..129391, complement)

NC_006151.1Genomic Context describing neighboring genes Neighboring gene envelope glycoprotein D Neighboring gene envelope glycoprotein I Neighboring gene envelope glycoprotein E Neighboring gene membrane protein US9 Neighboring gene virion protein US2 Neighboring gene transcriptional regulator ICP4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006151.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes. Takács IF, et al. BMC Mol Biol, 2013 Jan 29. PMID 23360468, Free PMC Article
  2. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. ICP22 protein selectively modifies the transcription of ohter virus genes.
    Title: The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes.
Submit: New GeneRIF Correction

General gene information

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Homology

regulatory

  • Loc: c127411-127406 experiment = consistent with mRNA size and sense in strain Ka , inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence
  • Loc: c129391-129385 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box

General protein information

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Preferred Names
regulatory protein ICP22

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006151.1 Reference assembly

    Range
    127387..129391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_068392.1 regulatory protein ICP22 [Suid alphaherpesvirus 1]

    See identical proteins and their annotated locations for YP_068392.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P24827
    UniProtKB/TrEMBL
    G3G927, I1WXI4, Q5PP73
    Conserved Domains (1) summary
    pfam02479
    Location:55 → 185
    Herpes_IE68; Herpesvirus immediate early protein
Nucleotide Protein
Heading Accession and Version

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