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rps12 ribosomal protein S12 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131499, updated on 12-Jul-2024

Summary

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Gene symbol
rps12
Gene description
ribosomal protein S12
Locus tag
OrsajCp001
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Genomic context

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See rps12 in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (67390..67503, complement) , (88473..89273, complement)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S18 Neighboring gene 50S ribosomal protein L20 Neighboring gene ribosomal protein S12 Neighboring gene ORF216 Neighboring gene photosystem II P680 chlorophyll A apoprotein Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene 30S ribosomal protein S7 Neighboring gene ORF72 Neighboring gene ORF85

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
  3. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
ribosomal protein S12

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    67390..67503 complement, 88473..89273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039359.1 ribosomal protein S12 [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039359.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C460, P0C461, P12149
    UniProtKB/TrEMBL
    A0A0K0LPJ0, A0A0K0LQN2, A0A5P8KMI2, A0A7S7YB31, J7EZD5
    Conserved Domains (1) summary
    CHL00051
    Location:1 → 123
    rps12; ribosomal protein S12
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P12149.1

Gene LinkOut

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