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H4c18 H4 clustered histone 18 [ Mus musculus (house mouse) ]

Gene ID: 319161, updated on 9-Dec-2024

Summary

Official Symbol
H4c18provided by MGI
Official Full Name
H4 clustered histone 18provided by MGI
Primary source
MGI:MGI:4843992
See related
Ensembl:ENSMUSG00000069305 AllianceGenome:MGI:4843992
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
H4c1; H4c2; H4c3; H4c4; H4c6; H4c8; H4c9; H4c11; H4c12; H4c14; H4c16; H4f16; Hist1h4n
Summary
Histones are basic nuclear proteins that are responsible for the nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is intronless and encodes a replication-dependent histone that is a member of the histone H4 family. Transcripts from this gene lack polyA tails but instead contain a palindromic termination element. [provided by RefSeq, Sep 2015]
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Genomic context

See H4c18 in Genome Data Viewer
Location:
13 A3.1; 13 8.0 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (22015962..22016367, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (21831792..21832197, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene H4 clustered histone 17 Neighboring gene predicted gene, 53778 Neighboring gene STARR-seq mESC enhancer starr_33867 Neighboring gene H2A clustered histone 24 Neighboring gene H2B clustered histone 24

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
histone H4
Names
histone cluster 1, H4n

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_175657.3NP_783588.1  histone H4

    See identical proteins and their annotated locations for NP_783588.1

    Status: REVIEWED

    Source sequence(s)
    AL589879
    Consensus CDS
    CCDS26300.1
    UniProtKB/Swiss-Prot
    A0AUM5, A4FUP8, A4QMY0, P62806, Q0VDL9, Q2M2Q5, Q5T006, Q6PDS7, Q811M0, Q9D0C9, Q9D6Q8
    UniProtKB/TrEMBL
    B2RTM0
    Related
    ENSMUSP00000100044.2, ENSMUST00000102979.2
    Conserved Domains (1) summary
    PLN00035
    Location:1103
    PLN00035; histone H4; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    22015962..22016367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)