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Spx spexin hormone [ Mus musculus (house mouse) ]

Gene ID: 319552, updated on 30-Apr-2024

Summary

Official Symbol
Spxprovided by MGI
Official Full Name
spexin hormoneprovided by MGI
Primary source
MGI:MGI:2442262
See related
Ensembl:ENSMUSG00000071112 AllianceGenome:MGI:2442262
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Npq; B230216G23Rik
Summary
Predicted to enable neuropeptide hormone activity; type 2 galanin receptor binding activity; and type 3 galanin receptor binding activity. Involved in long-chain fatty acid import into cell and negative regulation of appetite. Predicted to be located in dense core granule. Predicted to be active in cytoplasm and extracellular space. Is expressed in esophagus and stomach fundus submucosa. Orthologous to human SPX (spexin hormone). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E14 (RPKM 1.9), CNS E18 (RPKM 1.8) and 19 other tissues See more
Orthologs
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Genomic context

See Spx in Genome Data Viewer
Location:
6 G2; 6 74.03 cM
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (142359114..142365466)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (142413388..142419740)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene pyridine nucleotide-disulphide oxidoreductase domain 1 Neighboring gene RecQ protein-like Neighboring gene STARR-positive B cell enhancer ABC_E1716 Neighboring gene golgi transport 1B Neighboring gene glycogen synthase 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:142438685-142438868 Neighboring gene STARR-seq mESC enhancer starr_17706 Neighboring gene lactate dehydrogenase B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide hormone activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables neuropeptide hormone activity ISO
Inferred from Sequence Orthology
more info
 
enables neuropeptide hormone activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables type 2 galanin receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables type 3 galanin receptor binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in dense core granule ISO
Inferred from Sequence Orthology
more info
 
located_in dense core granule ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular space ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
spexin
Names
neuropeptide Q

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001242345.1NP_001229274.1  spexin isoform 1 precursor

    Status: VALIDATED

    Source sequence(s)
    AC142413, AK043509, AK045625, BG092156
    Consensus CDS
    CCDS85181.1
    UniProtKB/TrEMBL
    A0A1C7CYU9
    Related
    ENSMUSP00000118062.5, ENSMUST00000126521.9
    Conserved Domains (1) summary
    pfam15171
    Location:27118
    Spexin; Neuropeptide secretory protein family, NPQ, spexin
  2. NM_001369015.1NP_001355944.1  spexin isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC142413
    Consensus CDS
    CCDS90134.1
    UniProtKB/Swiss-Prot
    D3Z752
    Related
    ENSMUSP00000147302.2, ENSMUST00000211094.2
    Conserved Domains (1) summary
    pfam15171
    Location:27116
    Spexin; Neuropeptide secretory protein family, NPQ, spexin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    142359114..142365466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)