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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_200653.2 → NP_956947.2 transcriptional regulator ATRX
Status: VALIDATED
- Source sequence(s)
-
CR855117, CR931764
- UniProtKB/TrEMBL
- A0A8M1PD71, E7F4M2
- Related
- ENSDARP00000105895.5, ENSDART00000127594.5
- Conserved Domains (4) summary
-
- cd00046
Location:1142 → 1304
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- cd00079
Location:1562 → 1706
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- cd11726
Location:118 → 221
- ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
- pfam00176
Location:1117 → 1443
- SNF2_N; SNF2 family N-terminal domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007125.7 Reference GRCz11 Primary Assembly
- Range
-
10656492..10736965
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021480976.1 → XP_021336651.1 transcriptional regulator ATRX isoform X1
- UniProtKB/TrEMBL
-
A0A8M9QKH6
- Conserved Domains (4) summary
-
- cd00079
Location:1602 → 1746
- HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
- cd11726
Location:158 → 261
- ADDz_ATRX; ADDz domain found in ATRX (alpha-thalassemia/mental retardation, X-linked)
- pfam00176
Location:1157 → 1483
- SNF2_N; SNF2 family N-terminal domain
- cl26511
Location:594 → 1151
- Neuromodulin_N; Gap junction protein N-terminal region
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394895.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
253432..270447
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_2
Genomic
-
NW_018395312.1 Reference GRCz11 ALT_DRER_TU_2
- Range
-
174694..255753
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)